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RSPH3 protein (Latimeria chalumnae) - STRING interaction network
"RSPH3" - Radial spoke 3 homolog in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSPH3Radial spoke 3 homolog (Chlamydomonas) (317 aa)    
Predicted Functional Partners:
ODF2
Outer dense fiber of sperm tails 2 (836 aa)
     
   
  0.617
GAS8
Growth arrest-specific 8 (482 aa)
     
   
  0.586
C6orf165
Chromosome 6 open reading frame 165 (622 aa)
     
   
  0.570
RSPH1
Radial spoke head 1 homolog (Chlamydomonas) (234 aa)
     
   
  0.535
MORN3
MORN repeat containing 3 (238 aa)
     
   
  0.509
KPNA2
Karyopherin alpha 2 (RAG cohort 1, importin alpha 1) (517 aa)
     
   
  0.505
KPNA7
Karyopherin alpha 7 (importin alpha 8) (521 aa)
     
   
  0.505
KPNA3
Karyopherin alpha 3 (importin alpha 4) (521 aa)
     
   
  0.505
SPAG6
Sperm associated antigen 6 (477 aa)
     
   
  0.505
KPNA5
Karyopherin alpha 5 (importin alpha 6) (547 aa)
     
   
  0.505
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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