STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR0B1Nuclear receptor subfamily 0 group B member 1. (261 aa)    
Predicted Functional Partners:
NR5A2
Nuclear receptor subfamily 5 group A member 2.
    
0.718
H3A2Q0_LATCH
Nuclear receptor domain-containing protein.
    
 0.718
NR5A1
Nuclear receptor subfamily 5 group A member 1.
    
0.718
NCOR1
Nuclear receptor corepressor 1.
    
 0.655
NCOR2
Nuclear receptor corepressor 2.
    
 0.655
SALL4
Spalt like transcription factor 4.
    
 0.623
NR1I2
Nuclear receptor subfamily 1 group I member 2.
    
 
 0.596
WT1
WT1 transcription factor.
    
 0.585
AMH
Anti-Mullerian hormone.
     
 0.578
ESRRB
Estrogen related receptor beta.
    
 
 0.576
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.