STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA2ATransformer 2 alpha homolog. (289 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.936
SRSF1
Serine and arginine rich splicing factor 1a.
   
 0.924
SRSF10
Serine and arginine rich splicing factor 10.
   
0.867
SRSF2
Serine and arginine rich splicing factor 2a.
  
0.866
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.823
LOC102349599
Serine and arginine rich splicing factor 7a.
   
0.823
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.796
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.784
LOC102354399
Uncharacterized protein.
  
 0.758
SRSF6
Serine and arginine rich splicing factor 6.
  
 0.742
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.