STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3B5A0_LATCHFibronectin type-III domain-containing protein. (467 aa)    
Predicted Functional Partners:
EPO
Erythropoietin.
    
 0.982
JAK2
Tyrosine-protein kinase.
    
 0.946
LOC102363504
Tyrosine-protein kinase.
    
 0.946
GRB2
Growth factor receptor bound protein 2.
    
 0.841
TFRC
Transferrin receptor.
    
 0.814
TFR2
Transferrin receptor 2.
    
 0.814
LOC102356003
SH2 domain-containing protein.
    
 0.796
JAK1
Janus kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.796
H2ZYR6_LATCH
FERM domain-containing protein.
    
 0.782
LYN
Tyrosine-protein kinase.
    
 0.774
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: medium (74%) [HD]