STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102360404STRA6-like. (603 aa)    
Predicted Functional Partners:
PSMD11
Proteasome 26S subunit, non-ATPase 11.
    
  0.544
CCDC180
DUF4456 domain-containing protein.
 
  
  0.517
PSMC5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
  0.513
PSMC1
Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family.
    
  0.513
PSMB1
Proteasome subunit beta.
    
  0.495
PSMA4
Proteasome subunit alpha type.
    
  0.495
PSMA6
Proteasome subunit alpha type.
    
  0.495
TUBGCP4
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
    
  0.489
GAK
J domain-containing protein.
    
  0.480
PSMA2
Proteasome subunit alpha type.
    
  0.475
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.