STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3B708_LATCHUncharacterized protein. (379 aa)    
Predicted Functional Partners:
TEKT2
Tektin 2.
   
 
 0.884
EFHC1
EF-hand domain containing 1.
  
 
 0.870
MNS1
Meiosis specific nuclear structural 1.
    
 0.831
EFHC2
EF-hand domain containing 2.
   
 
 0.814
EFHB
EF-hand domain family member B.
   
   0.802
CFAP52
Cilia and flagella associated protein 52; Belongs to the peptidase C19 family.
   
  0.800
CFAP45
Cilia and flagella associated protein 45.
   
 0.797
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.788
LOC102363715
Uncharacterized protein.
   
   0.787
CFAP126
Cilia and flagella associated protein 126.
   
   0.787
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.