STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFT43Uncharacterized protein. (124 aa)    
Predicted Functional Partners:
IFT122
Intraflagellar transport 122.
    
 0.998
WDR35
WD repeat-containing protein 35.
    
 0.995
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.993
IFT140
Intraflagellar transport 140.
    
 0.991
WDR19
WD repeat domain 19.
    
 0.987
LOC102349115
WD_REPEATS_REGION domain-containing protein.
    
 0.962
TTC21A
Tetratricopeptide repeat domain 21A.
    
 0.935
IFT80
Intraflagellar transport 80.
    
 0.858
IFT74
Intraflagellar transport 74.
     
 0.813
C11orf74
Chromosome 11 open reading frame 74.
    
 
 0.812
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.