STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRA10AC1FRA10A associated CGG repeat 1. (327 aa)    
Predicted Functional Partners:
CWC27
CWC27 spliceosome associated cyclophilin.
   
   0.594
ENGASE
Endo-beta-N-acetylglucosaminidase.
      
 0.557
ESS2
Ess-2 splicing factor homolog.
    
 
 0.546
WNK2
WNK lysine deficient protein kinase 2.
    
  0.479
PDE6C
Phosphodiesterase.
      
 0.465
METTL3
Methyltransferase like 3; Belongs to the MT-A70-like family.
      
 0.461
CHERP
Calcium homeostasis endoplasmic reticulum protein.
    
 
 0.460
IK
IK cytokine.
   
   0.456
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
   
 
 0.456
SF3B2
Splicing factor 3b subunit 2.
    
   0.441
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.