STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102362575Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family. (101 aa)    
Predicted Functional Partners:
LOC102351525
Hematopoietic cell-specific Lyn substrate 1.
   
 0.681
M3XIB9_LATCH
Pentaxin.
     
 0.595
CTTN
Cortactin.
    
 0.549
LOC102365063
Apolipoprotein A-IV b, tandem duplicate 2.
    
 0.511
H3AVA7_LATCH
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.504
LOC102351296
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.504
B4GALT2
Beta-1,4-galactosyltransferase 2.
    
 0.487
LOC102347787
Sushi domain-containing protein.
      
 0.482
LOC102355730
Uncharacterized protein.
    
 0.446
H2ZY94_LATCH
Si:dkey-199f5.8.
    
 0.446
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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