STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXRA8Matrix remodeling associated 8. (436 aa)    
Predicted Functional Partners:
C2CD4C
C2 calcium dependent domain containing 4C.
      
 0.668
TMEM47
Transmembrane protein 47.
      
 0.668
GATAD2B
GATA zinc finger domain containing 2B.
      
 0.668
H3B976_LATCH
Uncharacterized protein.
      
 0.668
IPO13
Importin 13.
      
 0.668
KBTBD2
Kelch repeat and BTB domain containing 2.
      
 0.653
LDLRAD3
Low density lipoprotein receptor class A domain containing 3.
      
 0.614
CYB5R4
Cytochrome b5 reductase 4.
      
 0.579
IPO4
Importin 4.
      
 0.578
EPS15L1
Epidermal growth factor receptor pathway substrate 15 like 1.
      
 0.575
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.