STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LVB8_LEPOCUncharacterized protein. (85 aa)    
Predicted Functional Partners:
LOC102685500
Uncharacterized protein.
  
  
  0.885
SPHK1
Sphingosine kinase 1.
     
 0.862
B3GALNT1
Hexosyltransferase.
     
 0.792
B3GALT1
Hexosyltransferase.
     
 0.792
W5LVU4_LEPOC
Uncharacterized protein.
  
  
 
0.697
W5LXG5_LEPOC
Uncharacterized protein.
  
  
 
0.697
GBGT1
Uncharacterized protein.
  
  
 
0.693
W5M3Y8_LEPOC
ST3 beta-galactoside alpha-2,3-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
     
 0.567
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.