STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frrs1Uncharacterized protein. (594 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1a.
    
 0.828
W5N7F7_LEPOC
Regulatory associated protein of MTOR, complex 1.
    
 0.811
rictor
RPTOR independent companion of MTOR, complex 2b.
    
 0.800
W5LZJ4_LEPOC
MAPK associated protein 1.
    
 0.749
W5MZ39_LEPOC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.745
W5MG32_LEPOC
Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.743
mtor
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.743
W5MJK6_LEPOC
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 0.743
atp5pd
ATP synthase peripheral stalk subunit d.
   
 
 0.667
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.650
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.