STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpx1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (142 aa)    
Predicted Functional Partners:
gsr
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.972
gpx7
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
 
 0.945
gpx8
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
  
 0.942
W5MW99_LEPOC
Thioredoxin domain-containing protein.
  
 0.918
W5NJQ2_LEPOC
Uncharacterized protein.
   
 
 0.906
W5MAX3_LEPOC
Glutathione peroxidase 4b.
  
 
0.902
HPGDS
Hematopoietic prostaglandin D synthase; Belongs to the GST superfamily.
   
 
 0.899
gsto1
Glutathione S-transferase omega 2.
   
 0.897
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
     
 0.889
ggt1
Gamma-glutamyltransferase 1a.
    
 0.880
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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