STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dcaf10WD repeat domain 32. (511 aa)    
Predicted Functional Partners:
leo1
Uncharacterized protein.
    
 0.996
dcaf5
Ddb1 and cul4 associated factor 5.
     
 0.892
W5M043_LEPOC
Tetratricopeptide repeat domain 37.
    
 0.877
wdtc1
WD and tetratricopeptide repeats 1.
     
 0.867
dcaf4
WD repeat domain 21.
     
 0.863
W5MQ03_LEPOC
Ddb1 and cul4 associated factor 6.
     
 0.859
cul4a
Cullin 4A; Belongs to the cullin family.
    
  0.851
cul4b
Cullin 4B; Belongs to the cullin family.
    
  0.851
cdc73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.848
dda1
DET1 and DDB1 associated 1.
    
  0.846
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.