STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcf7l2Transcription factor 7 like 2. (602 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.991
leo1
Uncharacterized protein.
     
 0.977
nlk
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.967
LOC102695806
Junction plakoglobin b.
    
 0.952
lef1
Lymphoid enhancer-binding factor 1.
    
0.946
tcf7l1
Transcription factor 7 like 1b.
     
 
0.916
ctbp2
C-terminal binding protein 2a.
    
 0.912
W5MIF3_LEPOC
Mothers against decapentaplegic homolog.
    
 0.902
W5MVZ9_LEPOC
Transcription factor 7.
  
  
0.902
W5N5D9_LEPOC
Mothers against decapentaplegic homolog.
    
 0.902
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.