STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sox2SRY-box transcription factor 2. (315 aa)    
Predicted Functional Partners:
LOC102693253
POU domain protein.
    
 0.864
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.657
LOC102695806
Junction plakoglobin b.
    
 0.594
LOC102683363
Doublesex and mab-3 related transcription factor 1.
    
 0.575
qki
QKI, KH domain containing, RNA binding 2.
   
 
 0.571
sall4
Spalt-like transcription factor 4.
   
 0.562
W5MAX1_LEPOC
QKI, KH domain containing, RNA binding a.
   
 
 0.556
ube2i
Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.529
LOC102683539
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.529
W5MZ98_LEPOC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.529
Your Current Organism:
Lepisosteus oculatus
NCBI taxonomy Id: 7918
Other names: L. oculatus, spotted gar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.