STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000000368annotation not available (319 aa)    
Predicted Functional Partners:
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.557
ENSCHAP00000007100
annotation not available
      
 0.528
ENSCHAP00000013195
Cyclin-dependent kinase 9 (CDC2-related kinase).
   
  0.518
ENSCHAP00000023941
Trio Rho guanine nucleotide exchange factor a.
    
 0.510
ENSCHAP00000026350
annotation not available
    
 0.510
ENSCHAP00000057095
Kalirin RhoGEF kinase a.
    
 0.510
KALRN
Kalirin RhoGEF kinase.
    
 0.507
ENSCHAP00000019883
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
 0.490
eaf1
ELL associated factor 1.
    
 0.473
ENSCHAP00000058767
ELL associated factor 2.
    
 0.473
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.