STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000013540annotation not available (195 aa)    
Predicted Functional Partners:
fancl
FA complementation group L.
    
  0.660
ENSCHAP00000041952
FA complementation group G.
    
  0.660
ENSCHAP00000056281
FA complementation group F.
    
  0.660
ENSCHAP00000039041
FA complementation group C.
    
  0.568
ENSCHAP00000040972
FA complementation group C.
    
  0.568
ENSCHAP00000043897
FA complementation group E.
    
  0.562
rpl10a
Ribosomal protein L10a.
    
  0.562
ENSCHAP00000054807
annotation not available
    
0.543
ENSCHAP00000007771
annotation not available
    
  0.509
mrpl1
Mitochondrial ribosomal protein L1.
    
  0.509
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.