STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000020101annotation not available (523 aa)    
Predicted Functional Partners:
ENSCHAP00000033217
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase).
    
 0.837
ENSCHAP00000034474
Ubiquitin carboxyl-terminal hydrolase L5.
    
 0.837
ENSCHAP00000038384
annotation not available
    
  0.799
eed
Embryonic ectoderm development.
    
  0.775
ENSCHAP00000014372
Chromobox homolog 6a.
    
  0.766
ENSCHAP00000006054
Tripartite motif containing 37.
    
  0.765
KIF18A
Kinesin family member 18A.
    
0.762
ENSCHAP00000041549
Kinesin family member 21B.
    
 
0.761
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.757
csnk2b
Casein kinase 2 beta.
    
 0.744
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.