STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctc1CST telomere replication complex component 1. (1367 aa)    
Predicted Functional Partners:
stn1
STN1 subunit of CST complex.
    
 0.998
ENSCHAP00000034867
TEN1 subunit of CST complex.
    
 0.998
ENSCHAP00000010710
Polymerase (DNA directed), alpha 1.
   
 0.976
ENSCHAP00000044281
Protection of telomeres 1 homolog.
    
 0.970
ENSCHAP00000013600
DNA primase subunit 2.
    
 0.967
ENSCHAP00000057469
TERF1 (TRF1)-interacting nuclear factor 2.
     
 0.963
ENSCHAP00000017581
annotation not available
     
 0.953
ENSCHAP00000002451
annotation not available
     
 0.944
ENSCHAP00000041304
annotation not available
     
 0.943
ENSCHAP00000005364
annotation not available
     
 0.935
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.