STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000039099annotation not available (993 aa)    
Predicted Functional Partners:
tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.866
traf7
TNF receptor associated factor 7.
   
 0.817
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.719
ENSCHAP00000036270
Inter-alpha-trypsin inhibitor heavy chain 2.
 
 
0.716
ITIH3-2
Inter-alpha-trypsin inhibitor heavy chain 3.
 
 
0.715
ITIH3
Inter-alpha-trypsin inhibitor heavy chain 3.
 
 
0.713
ENSCHAP00000037298
Inter-alpha-trypsin inhibitor heavy chain 5.
 
 
0.709
ENSCHAP00000000456
annotation not available
    
 0.704
LOC105902549
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like.
    
 0.675
ENSCHAP00000001336
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.673
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.