STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000049468RAN binding protein 9. (609 aa)    
Predicted Functional Partners:
ENSCHAP00000021049
Required for meiotic nuclear division 5 homolog B.
  
 0.980
ENSCHAP00000030516
Armadillo repeat containing 8.
   
 0.966
WDR26
WD repeat domain 26.
   
 0.959
ENSCHAP00000019896
annotation not available
   
 0.959
LOC105906441
Glucose-induced degradation protein 8 homolog.
   
 0.938
gid8
GID complex subunit 8 homolog.
   
 0.938
GID4
GID complex subunit 4 homolog.
    
 0.932
LOC105888908
Glucose-induced degradation protein 4 homolog.
    
 0.932
mkln1
Muskelin 1.
    
 0.878
ENSCHAP00000016391
Macrophage stimulating 1 receptor b.
    
 0.703
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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