STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000058158annotation not available (306 aa)    
Predicted Functional Partners:
ENSCHAP00000056195
WD repeat domain 18.
   
 0.614
ENSCHAP00000031330
Rhomboid, veinlet-like 3 (Drosophila).
    
  0.599
RHBDL3
Rhomboid like 3.
    
  0.599
tex10
Testis expressed 10.
    
 0.597
ENSCHAP00000006597
Pescadillo.
   
 0.588
ENSCHAP00000037787
Centromere protein N.
    
  0.498
ENSCHAP00000002116
annotation not available
   
  0.497
rps14
Ribosomal protein S14.
   
  0.497
ENSCHAP00000024780
annotation not available
   
  0.497
ENSCHAP00000024808
annotation not available
   
  0.497
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.