STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pno1RNA-binding protein PNO1; Positively regulates dimethylation of two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA. Belongs to the PNO1 family. (252 aa)    
Predicted Functional Partners:
nob1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.995
bysl
Bystin-like.
   
 
 0.992
ltv1
Protein LTV1 homolog; Belongs to the LTV1 family.
   
 
 0.989
riok2
RIO kinase 2 (yeast).
   
 
 0.980
noc4l
Nucleolar complex protein 4 homolog.
   
 
 0.969
rps14
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.966
rps9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 0.964
rps7
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
  0.962
rps6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.957
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.955
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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