STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q1L946_DANRESi:ch211-212o1.2. (283 aa)    
Predicted Functional Partners:
cept1b
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.902
cept1a
Choline/ethanolamine phosphotransferase 1a; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.902
selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.902
tmem189
Transmembrane protein 189.
  
  
 
0.901
lpcat4
Lysophosphatidylcholine acyltransferase 4.
     
  0.900
pld1b
Phospholipase.
     
  0.900
F1RE58_DANRE
Si:ch211-168k14.2.
     
  0.900
pld1a
Phospholipase.
   
 
  0.900
pld3
Phospholipase D family, member 3.
     
  0.900
pld2
Phospholipase.
     
  0.900
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.