Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sdc3 | ext2 | ENSDARP00000131513 | ENSDARP00000073621 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. | 0.675 |
Sdc3 | extl2 | ENSDARP00000131513 | ENSDARP00000086549 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Exostosin-like glycosyltransferase 2. | 0.400 |
Sdc3 | extl3 | ENSDARP00000131513 | ENSDARP00000124029 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family. | 0.470 |
Sdc3 | gpc3 | ENSDARP00000131513 | ENSDARP00000142166 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Glypican-3 alpha subunit; Cell surface proteoglycan that bears heparan sulfate (By similarity). Negatively regulates the hedgehog signaling pathway (By similarity). Positively regulates the canonical and non-canonical Wnt signaling pathways (By similarity). Binds to CD81 which decreases the availability of free CD81 for binding to the transcriptional repressor HHEX, resulting in nuclear translocation of HHEX and transcriptional repression (By similarity). Inhibits the dipeptidyl peptidase activity of DPP4 (By similarity). Plays a role in limb patterning and skeletal development (By sim [...] | 0.822 |
Sdc3 | ndst1b | ENSDARP00000131513 | ENSDARP00000137017 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1b. | 0.599 |
Sdc3 | ndst2b | ENSDARP00000131513 | ENSDARP00000127253 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b. | 0.603 |
Sdc3 | sulf2a | ENSDARP00000131513 | ENSDARP00000009647 | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | Extracellular sulfatase. | 0.687 |
ext2 | Sdc3 | ENSDARP00000073621 | ENSDARP00000131513 | Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.675 |
ext2 | gpc3 | ENSDARP00000073621 | ENSDARP00000142166 | Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. | Glypican-3 alpha subunit; Cell surface proteoglycan that bears heparan sulfate (By similarity). Negatively regulates the hedgehog signaling pathway (By similarity). Positively regulates the canonical and non-canonical Wnt signaling pathways (By similarity). Binds to CD81 which decreases the availability of free CD81 for binding to the transcriptional repressor HHEX, resulting in nuclear translocation of HHEX and transcriptional repression (By similarity). Inhibits the dipeptidyl peptidase activity of DPP4 (By similarity). Plays a role in limb patterning and skeletal development (By sim [...] | 0.733 |
ext2 | ndst1b | ENSDARP00000073621 | ENSDARP00000137017 | Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1b. | 0.960 |
ext2 | ndst2b | ENSDARP00000073621 | ENSDARP00000127253 | Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b. | 0.814 |
ext2 | sulf2a | ENSDARP00000073621 | ENSDARP00000009647 | Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family. | Extracellular sulfatase. | 0.699 |
extl2 | Sdc3 | ENSDARP00000086549 | ENSDARP00000131513 | Exostosin-like glycosyltransferase 2. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.400 |
extl2 | extl3 | ENSDARP00000086549 | ENSDARP00000124029 | Exostosin-like glycosyltransferase 2. | Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family. | 0.931 |
extl2 | gpc3 | ENSDARP00000086549 | ENSDARP00000142166 | Exostosin-like glycosyltransferase 2. | Glypican-3 alpha subunit; Cell surface proteoglycan that bears heparan sulfate (By similarity). Negatively regulates the hedgehog signaling pathway (By similarity). Positively regulates the canonical and non-canonical Wnt signaling pathways (By similarity). Binds to CD81 which decreases the availability of free CD81 for binding to the transcriptional repressor HHEX, resulting in nuclear translocation of HHEX and transcriptional repression (By similarity). Inhibits the dipeptidyl peptidase activity of DPP4 (By similarity). Plays a role in limb patterning and skeletal development (By sim [...] | 0.479 |
extl2 | ndst1b | ENSDARP00000086549 | ENSDARP00000137017 | Exostosin-like glycosyltransferase 2. | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1b. | 0.481 |
extl2 | ndst2b | ENSDARP00000086549 | ENSDARP00000127253 | Exostosin-like glycosyltransferase 2. | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2b. | 0.478 |
extl2 | sulf2a | ENSDARP00000086549 | ENSDARP00000009647 | Exostosin-like glycosyltransferase 2. | Extracellular sulfatase. | 0.555 |
extl3 | Sdc3 | ENSDARP00000124029 | ENSDARP00000131513 | Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family. | Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. | 0.470 |
extl3 | extl2 | ENSDARP00000124029 | ENSDARP00000086549 | Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family. | Exostosin-like glycosyltransferase 2. | 0.931 |
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