Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ascl1a | dlx1a | ENSDARP00000056004 | ENSDARP00000011033 | Achaete-scute homolog 1a; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Required for the development of neurons in the epiphysis, acting partially redundantly with neurog1 and downstream of flh. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. Also involved in pituitary development; required cell-autonomously in adenohypophyseal cells for endocrine differentiation and for survival of a subset of cells. | Homeobox protein Dlx1a. | 0.692 |
ascl1a | dlx2a | ENSDARP00000056004 | ENSDARP00000103004 | Achaete-scute homolog 1a; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Required for the development of neurons in the epiphysis, acting partially redundantly with neurog1 and downstream of flh. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. Also involved in pituitary development; required cell-autonomously in adenohypophyseal cells for endocrine differentiation and for survival of a subset of cells. | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | 0.670 |
ascl1a | lhx6 | ENSDARP00000056004 | ENSDARP00000017657 | Achaete-scute homolog 1a; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Required for the development of neurons in the epiphysis, acting partially redundantly with neurog1 and downstream of flh. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. Also involved in pituitary development; required cell-autonomously in adenohypophyseal cells for endocrine differentiation and for survival of a subset of cells. | LIM homeobox 6. | 0.556 |
ascl1a | shha | ENSDARP00000056004 | ENSDARP00000125090 | Achaete-scute homolog 1a; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Required for the development of neurons in the epiphysis, acting partially redundantly with neurog1 and downstream of flh. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. Also involved in pituitary development; required cell-autonomously in adenohypophyseal cells for endocrine differentiation and for survival of a subset of cells. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.507 |
ascl1a | six3b | ENSDARP00000056004 | ENSDARP00000071625 | Achaete-scute homolog 1a; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Required for the development of neurons in the epiphysis, acting partially redundantly with neurog1 and downstream of flh. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. Also involved in pituitary development; required cell-autonomously in adenohypophyseal cells for endocrine differentiation and for survival of a subset of cells. | Sine oculis homeobox homolog 3b. | 0.543 |
ascl1b | dlx1a | ENSDARP00000022655 | ENSDARP00000011033 | Achaete-scute homolog 1b; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. May mediate transcription activation by binding to the E box-containing promoter. | Homeobox protein Dlx1a. | 0.574 |
ascl1b | dlx2a | ENSDARP00000022655 | ENSDARP00000103004 | Achaete-scute homolog 1b; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. May mediate transcription activation by binding to the E box-containing promoter. | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | 0.413 |
dlx1a | ascl1a | ENSDARP00000011033 | ENSDARP00000056004 | Homeobox protein Dlx1a. | Achaete-scute homolog 1a; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Required for the development of neurons in the epiphysis, acting partially redundantly with neurog1 and downstream of flh. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. Also involved in pituitary development; required cell-autonomously in adenohypophyseal cells for endocrine differentiation and for survival of a subset of cells. | 0.692 |
dlx1a | ascl1b | ENSDARP00000011033 | ENSDARP00000022655 | Homeobox protein Dlx1a. | Achaete-scute homolog 1b; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. May mediate transcription activation by binding to the E box-containing promoter. | 0.574 |
dlx1a | dlx2a | ENSDARP00000011033 | ENSDARP00000103004 | Homeobox protein Dlx1a. | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | 0.815 |
dlx1a | dlx2b | ENSDARP00000011033 | ENSDARP00000007080 | Homeobox protein Dlx1a. | Homeobox protein Dlx2b. | 0.822 |
dlx1a | foxg1a | ENSDARP00000011033 | ENSDARP00000094979 | Homeobox protein Dlx1a. | Forkhead box G1a. | 0.683 |
dlx1a | gad1b | ENSDARP00000011033 | ENSDARP00000110348 | Homeobox protein Dlx1a. | Glutamate decarboxylase 1b. | 0.608 |
dlx1a | lhx6 | ENSDARP00000011033 | ENSDARP00000017657 | Homeobox protein Dlx1a. | LIM homeobox 6. | 0.766 |
dlx1a | shha | ENSDARP00000011033 | ENSDARP00000125090 | Homeobox protein Dlx1a. | Sonic hedgehog protein A N-product; Sonic hedgehog protein: The C-terminal part of the sonic hedgehog protein precursor displays an autoproteolysis and a cholesterol transferase activity (By similarity). Both activities result in the cleavage of the full-length protein into two parts (ShhN and ShhC) followed by the covalent attachment of a cholesterol moiety to the C-terminal of the newly generated ShhN (By similarity). Both activities occur in the reticulum endoplasmic (By similarity). Once cleaved, ShhC is degraded in the endoplasmic reticulum (By similarity). | 0.604 |
dlx1a | six3b | ENSDARP00000011033 | ENSDARP00000071625 | Homeobox protein Dlx1a. | Sine oculis homeobox homolog 3b. | 0.598 |
dlx1a | tbr1b | ENSDARP00000011033 | ENSDARP00000019930 | Homeobox protein Dlx1a. | T-box brain transcription factor 1b. | 0.661 |
dlx2a | ascl1a | ENSDARP00000103004 | ENSDARP00000056004 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Achaete-scute homolog 1a; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Required for the development of neurons in the epiphysis, acting partially redundantly with neurog1 and downstream of flh. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. Also involved in pituitary development; required cell-autonomously in adenohypophyseal cells for endocrine differentiation and for survival of a subset of cells. | 0.670 |
dlx2a | ascl1b | ENSDARP00000103004 | ENSDARP00000022655 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Achaete-scute homolog 1b; Transcriptional regulator. May mediate transcription activation by binding to the E box-containing promoter (By similarity). Involved in neurogenesis. Involved in maintaining rhombomere boundaries in the hindbrain, probably via up-regulation of delta expression. May mediate transcription activation by binding to the E box-containing promoter. | 0.413 |
dlx2a | dlx1a | ENSDARP00000103004 | ENSDARP00000011033 | Homeobox protein Dlx2a; Involved in the development of the inner ear; Belongs to the distal-less homeobox family. | Homeobox protein Dlx1a. | 0.815 |
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