STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adamts6ADAM metallopeptidase with thrombospondin type 1 motif, 6. (1116 aa)    
Predicted Functional Partners:
fbn2a
Fibrillin 2a.
    
 
 0.585
glt8d2
Glycosyltransferase 8 domain-containing 2.
      
 0.564
adamtsl3
ADAMTS-like 3.
     
0.551
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
     
0.545
LOC101886422
ADAM metallopeptidase with thrombospondin type 1 motif, 14.
     
0.505
pofut2
Protein O-fucosyltransferase 2.
     
 0.500
adamtsl4
PLAC domain-containing protein.
     
0.499
adamts17
ADAM metallopeptidase with thrombospondin type 1 motif, 17.
     
0.496
NPFFR2
Novel protein similar to vertebrate neuropeptide FF receptor family; Belongs to the G-protein coupled receptor 1 family.
      
 0.488
adamtsl5
ADAMTS-like 5.
     
0.487
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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