STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
drd4-rsDopamine receptor D4-related sequence; Belongs to the G-protein coupled receptor 1 family. (418 aa)    
Predicted Functional Partners:
slc6a3
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
    
 
 0.640
grin2ab
Glutamate receptor, ionotropic, N-methyl D-aspartate 2A, b.
   
 
 0.632
grin1b
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
 
 0.613
grm1a
Glutamate receptor, metabotropic 1a.
   
 
 0.609
chrna6
Cholinergic receptor, nicotinic, alpha 6.
   
  
 0.608
grm1b
Glutamate receptor, metabotropic 1b.
    
 
 0.608
grin1a
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 
 0.604
grm3
Novel protein similar to vertebrate glutamate receptor, metabotropic 3 (GRM3).
   
 
 0.591
gria3a
Glutamate receptor, ionotropic, AMPA 3a.
   
 
 0.578
gabbr2
Gamma-aminobutyric acid (GABA) B receptor, 2.
   
  
 0.577
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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