STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhcgl1Rh family, C glycoprotein,-like 1; Belongs to the ammonium transporter (TC 2.A.49) family. Rh subfamily. (471 aa)    
Predicted Functional Partners:
slc13a5b
Solute carrier family 13 member 5b.
   
  
 0.934
slc34a2b
Solute carrier family 34 member 2b.
   
  
 0.864
slc2a3b
Solute carrier family 2 member 3b; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.862
slc4a2b
Anion exchange protein.
   
 
 0.859
SLCO3A1
Solute carrier organic anion transporter family member.
      
 0.807
slc2a8
Solute carrier family 2 member 8; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.804
slc2a15a
Solute carrier family 2 member 15a; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
  
 0.752
slc2a12
Solute carrier family 2, facilitated glucose transporter member 12; Insulin-regulated facilitative glucose transporter.
      
 0.744
slco3a1
Solute carrier organic anion transporter family member.
      
 0.743
slc13a1
Solute carrier family 13 (Sodium/sulphate symporters), member 1.
   
  
 0.733
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.