STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galnt2Polypeptide N-acetylgalactosaminyltransferase. (559 aa)    
Predicted Functional Partners:
c1galt1b
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
     
 0.929
efcab2
EF-hand calcium-binding domain 2.
      
 0.915
st6galnac1.2
Si:ch211-51n14.2; Belongs to the glycosyltransferase 29 family.
     
 0.906
proza
Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.
      
 0.833
b3galt1a
Hexosyltransferase.
      
 0.807
c1galt1c1
C1GALT1-specific chaperone 1.
     
 0.758
c1galt1a
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily.
     
 0.737
gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
      
 0.725
plcd1a
Phosphoinositide phospholipase C.
      
 0.720
golph3l
Golgi phosphoprotein 3-like.
      
 0.707
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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