STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyp2ae1Cytochrome P450, family 2, subfamily AE, polypeptide 1; Belongs to the cytochrome P450 family. (497 aa)    
Predicted Functional Partners:
LOC108179047
Guanine nucleotide-binding protein G(s) subunit alpha.
   
 
 0.836
tnika
TRAF2 and NCK-interacting kinase a.
   
  
 0.744
atad5a
ATPase family AAA domain-containing 5a.
      
 0.670
adcy6b
Adenylate cyclase type 6; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
      
 0.669
adcy3a
Adenylate cyclase type 3; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.
      
 0.666
btbd9
BTB (POZ) domain-containing 9.
    
 
 0.664
nrbp2b
Nuclear receptor-binding protein 2b.
      
 0.628
cyp3a65
Cytochrome P450, family 3, subfamily A, polypeptide 65; Belongs to the cytochrome P450 family.
  
0.618
cyp3c4
Cytochrome P450, family 3, subfamily C, polypeptide 4; Belongs to the cytochrome P450 family.
  
0.604
cyp3c3
Cytochrome P450, family 3, subfamily c, polypeptide 3; Belongs to the cytochrome P450 family.
  
0.604
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.