STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ifnphi1Interferon phi 1. (185 aa)    
Predicted Functional Partners:
irf3
Interferon regulatory factor 3.
     
 0.996
ifng1
Interferon gamma 1.
     
 0.965
crfb2
Cytokine receptor family member b2.
     
 0.963
isg15
ISG15 ubiquitin-like modifier.
   
  
 0.952
ifngr1l
Interferon gamma receptor 1-like.
     
 0.937
rela
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 
 0.936
ifnphi3
Interferon phi 3.
     
 0.936
stat1a
Signal transducer and activator of transcription.
     
 0.934
ifnphi2
Type I interferon 2.
     
 0.923
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
     
 0.917
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.