STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhdProbable D-lactate dehydrogenase, mitochondrial; Involved in D-lactate, but not L-lactate catabolic process. (497 aa)    
Predicted Functional Partners:
ldhbb
L-lactate dehydrogenase B-B chain; Belongs to the LDH/MDH superfamily. LDH family.
   
 
 0.974
ldha
L-lactate dehydrogenase A chain; Belongs to the LDH/MDH superfamily. LDH family.
   
 
 0.954
hagh
Hydroxyacylglutathione hydrolase, mitochondrial; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
    
 0.949
pkma
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.944
pklr
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.943
pkmb
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.943
ldhba
L-lactate dehydrogenase B-A chain; Belongs to the LDH/MDH superfamily. LDH family.
   
 
 0.930
pdhb
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.924
me3
Malic enzyme.
  
 
 0.922
me1
Malic enzyme.
  
 
 0.922
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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