STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnasel2Ribonuclease-like 2; Belongs to the pancreatic ribonuclease family. (150 aa)    
Predicted Functional Partners:
rnaset2l
Ribonuclease T2,-like; Belongs to the RNase T2 family.
      
 0.824
tnni2b.2
Troponin I type 2b (skeletal, fast), tandem duplicate 2.
   
  
 0.738
or107-1
Odorant receptor, family D, subfamily 107, member 1.
   
  
 0.737
sdf2
Stromal cell-derived factor 2.
      
 0.669
mrps36
Mitochondrial ribosomal protein S36.
      
 0.668
lrrc23
Leucine-rich repeat-containing 23.
   
  
 0.647
ccdc113
Coiled-coil domain-containing protein 113; May be involved in primary cilium formation.
      
 0.644
rnaset2
Ribonuclease T2; Has ribonuclease activity, with higher activity at acidic pH. Probably is involved in lysosomal degradation of ribosomal RNA.
      
 0.583
irak1bp1
Interleukin-1 receptor-associated kinase 1-binding protein 1 homolog; May be part of a signaling pathway that leads to NF-kappa-B activation; Belongs to the IRAK1BP1 family.
      
 0.582
rnasel4
Ribonuclease-like 4; Belongs to the pancreatic ribonuclease family.
  
  
0.580
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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