STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zgc:171480Zgc:171480. (133 aa)    
Predicted Functional Partners:
mrpl52
Mitochondrial ribosomal protein L52.
   
 
 0.965
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.959
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.953
mrpl51
39S ribosomal protein L51, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL51 family.
   
 
 0.951
mrps25
Mitochondrial ribosomal protein S25.
   
 
 0.950
mrps30
Mitochondrial ribosomal protein S30.
   
 
 0.950
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.944
mrps16
Mitochondrial ribosomal protein S16.
   
   0.942
mrpl21
Mitochondrial ribosomal protein L21.
   
 
 0.941
mrpl41
39S ribosomal protein L41, mitochondrial; Component of the mitochondrial ribosome large subunit. Also involved in apoptosis and cell cycle (By similarity).
   
 
 0.940
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.