Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F1QP65_DANRE | atf3 | ENSDARP00000105362 | ENSDARP00000027550 | Si:ch211-153j24.3. | Activating transcription factor 3. | 0.432 |
F1QP65_DANRE | fosaa | ENSDARP00000105362 | ENSDARP00000058705 | Si:ch211-153j24.3. | V-fos FBJ murine osteosarcoma viral oncogene homolog Aa. | 0.905 |
F1QP65_DANRE | fosab | ENSDARP00000105362 | ENSDARP00000043297 | Si:ch211-153j24.3. | V-fos FBJ murine osteosarcoma viral oncogene homolog Ab. | 0.906 |
F1QP65_DANRE | fosb | ENSDARP00000105362 | ENSDARP00000114070 | Si:ch211-153j24.3. | FBJ murine osteosarcoma viral oncogene homolog B. | 0.526 |
F1QP65_DANRE | jun | ENSDARP00000105362 | ENSDARP00000063911 | Si:ch211-153j24.3. | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | 0.976 |
F1QP65_DANRE | mapk10 | ENSDARP00000105362 | ENSDARP00000134326 | Si:ch211-153j24.3. | Mitogen-activated protein kinase. | 0.934 |
F1QP65_DANRE | mapk3 | ENSDARP00000105362 | ENSDARP00000094521 | Si:ch211-153j24.3. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.927 |
F1QP65_DANRE | mapk8a | ENSDARP00000105362 | ENSDARP00000146032 | Si:ch211-153j24.3. | Mitogen-activated protein kinase. | 0.934 |
F1QP65_DANRE | mapk8b | ENSDARP00000105362 | ENSDARP00000012611 | Si:ch211-153j24.3. | Mitogen-activated protein kinase 8; Responds to activation by environmental stress and pro- inflammatory cytokines by phosphorylating a number of transcription factors, primarily components of AP-1 such as c-Jun and ATF2 and thus regulates AP-1 transcriptional activity. May play a role in the regulation of the circadian clock. | 0.934 |
F1QP65_DANRE | mapk9 | ENSDARP00000105362 | ENSDARP00000099157 | Si:ch211-153j24.3. | Mitogen-activated protein kinase. | 0.934 |
atf3 | F1QP65_DANRE | ENSDARP00000027550 | ENSDARP00000105362 | Activating transcription factor 3. | Si:ch211-153j24.3. | 0.432 |
atf3 | fosaa | ENSDARP00000027550 | ENSDARP00000058705 | Activating transcription factor 3. | V-fos FBJ murine osteosarcoma viral oncogene homolog Aa. | 0.451 |
atf3 | fosab | ENSDARP00000027550 | ENSDARP00000043297 | Activating transcription factor 3. | V-fos FBJ murine osteosarcoma viral oncogene homolog Ab. | 0.863 |
atf3 | fosb | ENSDARP00000027550 | ENSDARP00000114070 | Activating transcription factor 3. | FBJ murine osteosarcoma viral oncogene homolog B. | 0.737 |
atf3 | jun | ENSDARP00000027550 | ENSDARP00000063911 | Activating transcription factor 3. | Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. | 0.988 |
atf3 | mapk10 | ENSDARP00000027550 | ENSDARP00000134326 | Activating transcription factor 3. | Mitogen-activated protein kinase. | 0.514 |
atf3 | mapk3 | ENSDARP00000027550 | ENSDARP00000094521 | Activating transcription factor 3. | Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. | 0.422 |
atf3 | mapk8b | ENSDARP00000027550 | ENSDARP00000012611 | Activating transcription factor 3. | Mitogen-activated protein kinase 8; Responds to activation by environmental stress and pro- inflammatory cytokines by phosphorylating a number of transcription factors, primarily components of AP-1 such as c-Jun and ATF2 and thus regulates AP-1 transcriptional activity. May play a role in the regulation of the circadian clock. | 0.473 |
atf3 | mapk9 | ENSDARP00000027550 | ENSDARP00000099157 | Activating transcription factor 3. | Mitogen-activated protein kinase. | 0.414 |
fosaa | F1QP65_DANRE | ENSDARP00000058705 | ENSDARP00000105362 | V-fos FBJ murine osteosarcoma viral oncogene homolog Aa. | Si:ch211-153j24.3. | 0.905 |
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