STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rasl11aRas-like protein family member 11A-like; Regulator of rDNA transcription; Belongs to the small GTPase superfamily. Ras family. (253 aa)    
Predicted Functional Partners:
arf2a
ADP-ribosylation factor 2a; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.807
itsn2a
Intersectin 2a.
    
 
 0.581
itsn2b
Intersectin 2b.
    
 
 0.581
itsn1
Intersectin 1 (SH3 domain protein).
    
 
 0.551
im:7152348
Im:7152348.
    
 
 0.497
shank3a
SH3 and multiple ankyrin repeat domains 3a.
    
 
 0.486
shank3b
SH3 and multiple ankyrin repeat domains 3b.
    
 
 0.486
shank1
SH3 and multiple ankyrin repeat domains 1.
    
 
 0.486
arf1
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.464
ENSDARP00000139721
Si:dkeyp-97a10.2.
   
 
 0.401
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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