STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tent5abTerminal nucleotidyltransferase 5Ab. (389 aa)    
Predicted Functional Partners:
bccip
Protein BCCIP homolog; During interphase, required for microtubule organizing and anchoring activities. During mitosis, required for the organization and stabilization of the spindle pole. May promote cell cycle arrest and DNA repair; Belongs to the BCP1 family.
    
 
 0.864
znhit6
Zinc finger HIT-type-containing 6.
    
 
 0.773
E9QG61_DANRE
Si:dkey-58b18.8.
      
 0.745
kcnh4a
Potassium voltage-gated channel, subfamily H (eag-related), member 4a.
      
 0.743
mto1
Mitochondrial tRNA translation optimization 1.
    
 
 0.698
glt8d2
Glycosyltransferase 8 domain-containing 2.
      
 0.669
sgsm1a
Small G protein-signaling modulator 1a.
      
 0.666
trip6
Uncharacterized protein.
      
 0.658
dennd1b
DENN/MADD domain-containing 1B.
      
 0.620
spint1b
Serine peptidase inhibitor, Kunitz type 1 b.
      
 0.583
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: medium (74%) [HD]