STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nucb1Nucleobindin 1. (454 aa)    
Predicted Functional Partners:
gnpda1
Glucosamine-6-phosphate isomerase.
   
  
 0.647
fibpa
Fibroblast growth factor (acidic) intracellular-binding protein a.
   
  
 0.634
arfgap2
ADP-ribosylation factor GTPase-activating protein 2.
   
  
 0.586
hp
Haptoglobin.
      
 0.581
fam20cb
FAM20C golgi-associated secretory pathway kinase b.
    
 0.573
tbc1d25
TBC1 domain family, member 25.
      
 0.569
pik3c2g
Phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma; Belongs to the PI3/PI4-kinase family.
      
 0.569
plekha5
Pleckstrin homology domain-containing, family A member 5.
      
 0.554
fndc5b
Fibronectin type III domain-containing protein 5; [Irisin]: may mediate beneficial effects of muscular exercise.
      
 0.553
plekha7b
Pleckstrin homology domain-containing, family A member 7b.
      
 0.528
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.