STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc7a7Solute carrier family 7 member 7. (501 aa)    
Predicted Functional Partners:
slc3a2a
Solute carrier family 3 member 2a.
   
 
 0.816
slc3a1
Solute carrier family 3 member 1.
   
 
 0.805
slc1a1
Amino acid transporter.
   
  
 0.699
slc1a5
Amino acid transporter.
   
  
 0.673
slc6a19b
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 0.672
slc25a34
Solute carrier family 25 member 34.
      
 0.653
slc1a2a
Amino acid transporter.
   
  
 0.649
slc43a3b
Solute carrier family 43 member 3b.
   
  
 0.609
slc43a1a
Solute carrier family 43 member 1a.
      
 0.607
slc1a2b
Amino acid transporter.
   
  
 0.590
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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