STRINGSTRING
cdc16 protein (Danio rerio) - STRING interaction network
"cdc16" - Cell division cycle 16 homolog (S. cerevisiae) in Danio rerio
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc16Cell division cycle 16 homolog (S. cerevisiae) (616 aa)    
Predicted Functional Partners:
anapc4
Anaphase promoting complex subunit 4 (806 aa)
     
  0.999
cdc23
CDC23 (cell division cycle 23, yeast, homolog) (579 aa)
     
  0.998
anapc1
Anaphase promoting complex subunit 1 (1932 aa)
     
  0.998
cdc20
Cell division cycle 20 homolog (496 aa)
     
  0.998
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast) (202 aa)
     
  0.998
anapc10
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (185 aa)
     
  0.998
anapc7
Anaphase promoting complex subunit 7 (566 aa)
     
  0.998
anapc16
Anaphase promoting complex subunit 16 (136 aa)
       
  0.998
cdc26
Anaphase-promoting complex subunit CDC26; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins- it mainly mediates the formation of ’Lys-11’-linked polyubiquitin chains and, to a lower extent, the formation of ’Lys-48’- and ’Lys-63’-linked polyubiquitin chains (By similarity). May recruit the E2 ubiquitin-conjugating enzymes to the complex; Belongs to the CDC26 family (88 aa)
       
  0.997
anapc2
Anaphase promoting complex subunit 2; Belongs to the cullin family (802 aa)
     
  0.997
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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