Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| derl2 | man1a2 | ENSDARP00000062174 | ENSDARP00000143611 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | 0.464 |
| derl2 | sec61a1 | ENSDARP00000062174 | ENSDARP00000033318 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Protein transport protein Sec61 subunit alpha-like 1; Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adapter proteins (By similarity). Plays a role in the pronephric kidney tubule development. | 0.527 |
| derl2 | tmub2 | ENSDARP00000062174 | ENSDARP00000073431 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Transmembrane and ubiquitin-like domain-containing 2. | 0.491 |
| derl2 | ubxn1 | ENSDARP00000062174 | ENSDARP00000108064 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | UBX domain-containing protein 1; Ubiquitin-binding protein that specifically binds 'Lys-6'- linked polyubiquitin chains. Component of a complex required to couple deglycosylation and proteasome-mediated degradation of misfolded proteins in the endoplasmic reticulum that are retrotranslocated in the cytosol. Involved in ubiquitin-proteasome systems (By similarity). | 0.815 |
| man1a2 | derl2 | ENSDARP00000143611 | ENSDARP00000062174 | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.464 |
| man1a2 | tmub2 | ENSDARP00000143611 | ENSDARP00000073431 | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | Transmembrane and ubiquitin-like domain-containing 2. | 0.567 |
| man1a2 | ubxn1 | ENSDARP00000143611 | ENSDARP00000108064 | alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. | UBX domain-containing protein 1; Ubiquitin-binding protein that specifically binds 'Lys-6'- linked polyubiquitin chains. Component of a complex required to couple deglycosylation and proteasome-mediated degradation of misfolded proteins in the endoplasmic reticulum that are retrotranslocated in the cytosol. Involved in ubiquitin-proteasome systems (By similarity). | 0.567 |
| nedd8 | tmub2 | ENSDARP00000021095 | ENSDARP00000073431 | NEDD8 ubiquitin-like modifier. | Transmembrane and ubiquitin-like domain-containing 2. | 0.461 |
| nedd8 | uba5 | ENSDARP00000021095 | ENSDARP00000087478 | NEDD8 ubiquitin-like modifier. | Ubiquitin-like modifier-activating enzyme 5; E1-like enzyme which activates ufm1 and sumo2. | 0.719 |
| nedd8 | ufc1 | ENSDARP00000021095 | ENSDARP00000036899 | NEDD8 ubiquitin-like modifier. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with ufm1 via a thioester linkage. | 0.520 |
| pip5k1aa | tmub2 | ENSDARP00000130044 | ENSDARP00000073431 | Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a. | Transmembrane and ubiquitin-like domain-containing 2. | 0.564 |
| sec61a1 | derl2 | ENSDARP00000033318 | ENSDARP00000062174 | Protein transport protein Sec61 subunit alpha-like 1; Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adapter proteins (By similarity). Plays a role in the pronephric kidney tubule development. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.527 |
| sec61a1 | stt3a | ENSDARP00000033318 | ENSDARP00000136997 | Protein transport protein Sec61 subunit alpha-like 1; Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adapter proteins (By similarity). Plays a role in the pronephric kidney tubule development. | STT3 oligosaccharyltransferase complex catalytic subunit A. | 0.952 |
| sec61a1 | stt3b | ENSDARP00000033318 | ENSDARP00000093301 | Protein transport protein Sec61 subunit alpha-like 1; Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adapter proteins (By similarity). Plays a role in the pronephric kidney tubule development. | STT3 oligosaccharyltransferase complex catalytic subunit B. | 0.951 |
| sec61a1 | tmub2 | ENSDARP00000033318 | ENSDARP00000073431 | Protein transport protein Sec61 subunit alpha-like 1; Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adapter proteins (By similarity). Plays a role in the pronephric kidney tubule development. | Transmembrane and ubiquitin-like domain-containing 2. | 0.540 |
| sec61a1 | uba5 | ENSDARP00000033318 | ENSDARP00000087478 | Protein transport protein Sec61 subunit alpha-like 1; Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adapter proteins (By similarity). Plays a role in the pronephric kidney tubule development. | Ubiquitin-like modifier-activating enzyme 5; E1-like enzyme which activates ufm1 and sumo2. | 0.508 |
| sec61a1 | ufc1 | ENSDARP00000033318 | ENSDARP00000036899 | Protein transport protein Sec61 subunit alpha-like 1; Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adapter proteins (By similarity). Plays a role in the pronephric kidney tubule development. | Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with ufm1 via a thioester linkage. | 0.433 |
| stt3a | sec61a1 | ENSDARP00000136997 | ENSDARP00000033318 | STT3 oligosaccharyltransferase complex catalytic subunit A. | Protein transport protein Sec61 subunit alpha-like 1; Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adapter proteins (By similarity). Plays a role in the pronephric kidney tubule development. | 0.952 |
| stt3a | stt3b | ENSDARP00000136997 | ENSDARP00000093301 | STT3 oligosaccharyltransferase complex catalytic subunit A. | STT3 oligosaccharyltransferase complex catalytic subunit B. | 0.962 |
| stt3a | tmub2 | ENSDARP00000136997 | ENSDARP00000073431 | STT3 oligosaccharyltransferase complex catalytic subunit A. | Transmembrane and ubiquitin-like domain-containing 2. | 0.540 |
page 1 of 3