STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc24a2Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (619 aa)    
Predicted Functional Partners:
arvcfa
ARVCF delta catenin family member a.
   
  
 0.738
lrrcc1
Leucine-rich repeat and coiled-coil centrosomal protein 1.
      
 0.719
crygs3
Crystallin, gamma S3; Belongs to the beta/gamma-crystallin family.
      
 0.650
crygm2d16
Crystallin, gamma M2d16; Belongs to the beta/gamma-crystallin family.
      
 0.650
slc38a11
Putative sodium-coupled neutral amino acid transporter 11; Putative sodium-dependent amino acid/proton antiporter. Belongs to the amino acid/polyamine transporter 2 family.
   
  
 0.622
guca1g
Guanylate cyclase activator 1g.
   
  
 0.603
crygm2e
Crystallin, gamma M2e; Belongs to the beta/gamma-crystallin family.
   
  
 0.588
crygs2
Crystallin, gamma S2; Belongs to the beta/gamma-crystallin family.
      
 0.580
cabp2a
Calcium-binding protein 2a.
   
  
 0.573
tssk6
Testis-specific serine kinase 6; Belongs to the protein kinase superfamily.
   
  
 0.572
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (28%) [HD]