Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7F9K6_DANRE | acta1a | ENSDARP00000101251 | ENSDARP00000052837 | Si:dkey-234i14.3. | Actin alpha 1, skeletal muscle a. | 0.567 |
E7F9K6_DANRE | sall3b | ENSDARP00000101251 | ENSDARP00000090954 | Si:dkey-234i14.3. | Spalt-like transcription factor 3b. | 0.482 |
E7F9K6_DANRE | zgc:86709 | ENSDARP00000101251 | ENSDARP00000075110 | Si:dkey-234i14.3. | Novel actin protein. | 0.611 |
acta1a | E7F9K6_DANRE | ENSDARP00000052837 | ENSDARP00000101251 | Actin alpha 1, skeletal muscle a. | Si:dkey-234i14.3. | 0.567 |
acta1a | arid4a | ENSDARP00000052837 | ENSDARP00000064411 | Actin alpha 1, skeletal muscle a. | AT-rich interactive domain 4A (RBP1-like). | 0.569 |
acta1a | arid4b | ENSDARP00000052837 | ENSDARP00000107839 | Actin alpha 1, skeletal muscle a. | Translocase of outer mitochondrial membrane 20. | 0.569 |
acta1a | sall3b | ENSDARP00000052837 | ENSDARP00000090954 | Actin alpha 1, skeletal muscle a. | Spalt-like transcription factor 3b. | 0.400 |
acta1a | zgc:86709 | ENSDARP00000052837 | ENSDARP00000075110 | Actin alpha 1, skeletal muscle a. | Novel actin protein. | 0.608 |
arid4a | acta1a | ENSDARP00000064411 | ENSDARP00000052837 | AT-rich interactive domain 4A (RBP1-like). | Actin alpha 1, skeletal muscle a. | 0.569 |
arid4a | sall3b | ENSDARP00000064411 | ENSDARP00000090954 | AT-rich interactive domain 4A (RBP1-like). | Spalt-like transcription factor 3b. | 0.450 |
arid4a | zgc:86709 | ENSDARP00000064411 | ENSDARP00000075110 | AT-rich interactive domain 4A (RBP1-like). | Novel actin protein. | 0.569 |
arid4b | acta1a | ENSDARP00000107839 | ENSDARP00000052837 | Translocase of outer mitochondrial membrane 20. | Actin alpha 1, skeletal muscle a. | 0.569 |
arid4b | sall3b | ENSDARP00000107839 | ENSDARP00000090954 | Translocase of outer mitochondrial membrane 20. | Spalt-like transcription factor 3b. | 0.450 |
arid4b | zgc:86709 | ENSDARP00000107839 | ENSDARP00000075110 | Translocase of outer mitochondrial membrane 20. | Novel actin protein. | 0.569 |
pou5f3 | sall3b | ENSDARP00000065816 | ENSDARP00000090954 | POU domain, class 5, transcription factor 1; Involved in early development of embryos, especially in the process of gastrulation. May play an important role in establishing and specifying rhombomeric segments. Seems to be required to maintain the cells in a highly undifferentiated state. In contrast to POU2, T-POU2 lacks DNA-binding activity because of its incomplete pou domain structure. Overexpression of POU2 does not have any effect on development, whereas overexpression of t-POU2 causes developmental retardation or arrest before gastrulation; Belongs to the POU transcription factor [...] | Spalt-like transcription factor 3b. | 0.400 |
rgn | sall3b | ENSDARP00000130159 | ENSDARP00000090954 | Regucalcin; Gluconolactonase with low activity towards other sugar lactones, including gulonolactone and galactonolactone. Catalyzes a key step in ascorbic acid (vitamin C) biosynthesis. Can also hydrolyze diisopropyl phosphorofluoridate and phenylacetate (in vitro). Calcium- binding protein. Modulates Ca(2+) signaling, and Ca(2+)-dependent cellular processes and enzyme activities (By similarity). | Spalt-like transcription factor 3b. | 0.744 |
sall3b | E7F9K6_DANRE | ENSDARP00000090954 | ENSDARP00000101251 | Spalt-like transcription factor 3b. | Si:dkey-234i14.3. | 0.482 |
sall3b | acta1a | ENSDARP00000090954 | ENSDARP00000052837 | Spalt-like transcription factor 3b. | Actin alpha 1, skeletal muscle a. | 0.400 |
sall3b | arid4a | ENSDARP00000090954 | ENSDARP00000064411 | Spalt-like transcription factor 3b. | AT-rich interactive domain 4A (RBP1-like). | 0.450 |
sall3b | arid4b | ENSDARP00000090954 | ENSDARP00000107839 | Spalt-like transcription factor 3b. | Translocase of outer mitochondrial membrane 20. | 0.450 |
page 1 of 2