STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnaset2lRibonuclease T2,-like; Belongs to the RNase T2 family. (229 aa)    
Predicted Functional Partners:
rnasel4
Ribonuclease-like 4; Belongs to the pancreatic ribonuclease family.
      
 0.854
rnasel2
Ribonuclease-like 2; Belongs to the pancreatic ribonuclease family.
      
 0.824
rnasel3
Ribonuclease-like 3; Ribonuclease. Angiogenic. Plays a role in host defense. Exhibits strong antibacterial activity against Gram-negative bacteria but mild antibacterial activity against Gram-positive bacteria. The RNase activity is not required for the bactericidal activity. Belongs to the pancreatic ribonuclease family.
      
 0.766
sidt2
SID1 transmembrane family, member 2.
      
 0.743
znhit3
Zinc finger, HIT-type-containing 3.
      
 0.544
fgfr1op
Chemokine (C-C motif) receptor 6a.
      
 0.418
sord
Sorbitol dehydrogenase.
   
  
 0.407
pus7l
Pseudouridylate synthase 7 homolog-like protein; Pseudouridylate synthase that catalyzes pseudouridylation of RNAs; Belongs to the pseudouridine synthase TruD family.
      
 0.400
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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