STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map1aaMicrotubule-associated protein 1Aa. (2583 aa)    
Predicted Functional Partners:
sypb
Synaptophysin b.
   
  
 0.858
il4r.2
Interleukin 4 receptor, tandem duplicate 1.
    
 
 0.843
zgc:110796
Zgc:110796.
   
  
 0.645
msi1
Musashi RNA-binding protein 1.
      
 0.630
il4r.1
Interleukin 4 receptor, tandem duplicate 1.
    
 
 0.586
eno2
Eno2 protein.
   
  
 0.579
aplnrb
Apelin receptor B; Receptor for apelin receptor early endogenous ligand (apela) and apelin (apln) hormones coupled to G proteins that inhibit adenylate cyclase activity. Plays a key role in early development such as gastrulation, blood vessels formation and heart morphogenesis by acting as a receptor for apela hormone, promoting endoderm and mesendoderm cell migration and regulating the migration of cells fated to become myocardial progenitors, respectively. Positively regulates angioblast migration toward the embryonic midline, i.e. the position of the future vessel formation, during [...]
      
 0.542
her4.1
Hairy-related 4, tandem duplicate 1.
      
 0.471
fmr1
FMRP translational regulator 1.
   
 
 0.452
htr1ab
5-hydroxytryptamine (serotonin) receptor 1A b.
      
 0.451
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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