STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptk6bTyrosine-protein kinase. (511 aa)    
Predicted Functional Partners:
cbl
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.831
ptk6a
Tyrosine-protein kinase.
  
  
 
0.806
khdrbs2
KH domain-containing, RNA-binding, signal transduction-associated protein 2; RNA-binding protein that plays a role in the regulation of alternative splicing; Belongs to the KHDRBS family.
    
 0.802
KHDRBS3
KH RNA binding domain containing, signal transduction associated 3.
    
 0.802
bcar1
BCAR1 scaffold protein, Cas family member.
   
 0.784
khdrbs1b
KH domain-containing, RNA-binding, signal transduction-associated 1b.
    
 0.762
akt3b
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
  
0.759
SRMS
Tyrosine-protein kinase.
  
  
 
0.756
sfpq
Splicing factor proline/glutamine-rich.
    
  0.755
pxnb
Paxillin; Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion). Belongs to the paxillin family.
   
 0.752
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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