STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d10abTBC1 domain family, member 10Ab. (478 aa)    
Predicted Functional Partners:
sytl1
Synaptotagmin-like 1.
     
  0.900
rab35b
RAB35, member RAS oncogene family b.
   
 0.886
tbc1d24
TBC1 domain family, member 24.
     
 0.799
dennd1b
DENN/MADD domain-containing 1B.
   
  
 0.787
acap2
ArfGAP with coiled-coil, ankyrin repeat and PH domains 2.
   
  
 0.749
arf6b
ADP-ribosylation factor 6a; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.741
arf5
ADP-ribosylation factor 5; Belongs to the small GTPase superfamily. Arf family.
   
  
 0.570
rab7b
RAB7b, member RAS oncogene family.
      
 0.543
zgc:100918
Zgc:100918.
      
 0.543
tbc1d10c
TBC1 domain family, member 10C.
  
  
0.482
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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