STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klf13Kruppel-like factor 13. (258 aa)    
Predicted Functional Partners:
sin3aa
SIN3 transcription regulator family member Aa.
    
 
 0.677
klhl18
Kelch-like family member 18.
    
 
 0.541
klhl5
Kelch-like family member 5.
    
 
 0.519
mtmr10
Myotubularin-related protein 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class myotubularin subfamily.
    
 
 0.504
gata4
GATA-binding protein 4.
    
 
 0.491
bzw1b
Basic leucine zipper and W2 domain-containing protein 1-B; Enhances histone H4 gene transcription but does not seem to bind DNA directly.
   
 
 0.467
pwp1
PWP1 homolog (S. cerevisiae).
      
 0.452
klhl2
Kelch-like family member 2.
    
 
 0.442
arf2a
ADP-ribosylation factor 2a; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.426
nr0b2b
Nuclear receptor subfamily 0, group B, member 2b.
    
 
 0.414
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.